# Table of Contents

## In addition to this wiki, visit [www.XROMM.org](http://www.xromm.org) for general information about XROMM, the [Bitbucket XMALab wiki](https://bitbucket.org/xromm/xmalab/wiki/Home) for XMALab User Manual, the [Bitbucket MayaTools wiki](https://bitbucket.org/xromm/xromm_mayatools/wiki/Home) for descriptions of each tool in the MayaTools Scripts. For XROMM data management, see the [GitBook XMAPortal User Manual](https://gitbook.brown.edu/xromm/xromm-xmaportal-user-manual). <a href="#tableofcontents-visitwww.xromm.orgforgeneralinformationaboutxromm.seebitbucketxmalabwikiforxmalabuse" id="tableofcontents-visitwww.xromm.orgforgeneralinformationaboutxromm.seebitbucketxmalabwikiforxmalabuse"></a>

## Getting Started

* [Introduction](/xromm/xromm-introduction-to-xromm.md)
* [Tutorial for XMALab with example data](http://xmaportal.org/sandbox/larequest.php?request=explorePublicStudy\&StudyID=49\&instit=SANDBOX1)

## Downloads and Installation

* Download and configure [Maya](https://www.autodesk.com/education/free-software/maya)
* **To download XROMM MayaTools Scripts, see** [**Bitbucket MayaTools**](https://bitbucket.org/xromm/xromm_mayatools/src/master/) **for instructions**![](/files/-M-QIYVChL-fg6a-oKTW)Distortion Correction
* Use [XMALab](https://bitbucket.org/xromm/xmalab/) software for Undistortion, Calibration and Marker tracking. See [Bitbucket XMALab wiki](https://bitbucket.org/xromm/xmalab/wiki/Home) for instructions.

## Model Generation

The OsiriX open source project has been taken over by [Horos Project](https://www.horosproject.org) consortium. Free 64-bit version from <https://www.horosproject.org>.

* [Creating 3D models using Amira software](/xromm/model-generation/xromm-creating-3d-models-using-amira-software.md)
* [Creating 3D models with Horos](/xromm/model-generation/xromm-creating-3d-models-with-horos.md)
* [Creating 3D models with 3D Slicer](/xromm/model-generation/xromm-creating-3d-models-with-3d-slicer.md)
* [Cleaning up 3D models with Geomagic](/xromm/model-generation/xromm-cleaning-up-3d-models-with-geomagic.md)
* [Cleaning 3D models with MeshLab](/xromm/model-generation/xromm-cleaning-3d-models-with-meshlab.md)
* [Measure CT Marker Coordinates in Maya](/xromm/model-generation/xromm-measure-ct-marker-coordinates-in-maya.md)

## Animate Bones and Markers

* [Importing mesh models into Maya from Horos](/xromm/animate-bones-and-markers/xromm-importing-mesh-models-into-maya-from-horos.md)
* [Animate Bones](/xromm/animate-bones-and-markers/xromm-animate-bones-in-maya.md)
* [Check animation](/xromm/animate-bones-and-markers/xromm-check-your-animation-with-mayacams.md)

## Maya Analysis and Visualization

* [Create Joint Coordinate System (JCS)](/xromm/maya-analysis-and-visualization/xromm-working-with-joint-coordinate-systems-jcs.md)
* [Measure and export distance between two points](/xromm/maya-analysis-and-visualization/xromm-measuring-and-exporting-the-distance-between-two-points.md)
* [Measure the XYZ Coordinates of a Point Over Time](/xromm/maya-analysis-and-visualization/xromm-measuring-xyz-coordinates-of-a-point-over-time.md)
* [Parent a Camera to a reference bone](/xromm/maya-analysis-and-visualization/xromm-parent-a-camera-to-a-reference-bone.md)
* [Calculate Relative Motion](/xromm/maya-analysis-and-visualization/xromm-relative-motion.md)

## Scientific Rotoscoping

* Use [XMALab](https://bitbucket.org/xromm/xmalab/) for exporting undistorted Trial images
* [X-Ray Cameras in Maya](/xromm/scientific-rotoscoping/xromm-recreate-x-ray-cameras-in-maya.md)
* [Importing mesh models into Maya from Horos](/xromm/animate-bones-and-markers/xromm-importing-mesh-models-into-maya-from-horos.md)
* [Scientific Rotoscoping](/xromm/scientific-rotoscoping/xromm-scientific-rotoscoping-in-maya.md)
* [Rotoscoping with one or two markers](/xromm/scientific-rotoscoping/xromm-animating-a-bone-with-one-or-two-markers.md)

## Tips and Tools

![(lightbulb)](/files/-M-QIYVBH80yLrXCVYWK) Note: Regular Users of the wiki, please add any pages you use regularly

* [Open Newer Maya Files](/xromm/tips-and-tools/xromm-open-maya-files-from-a-newer-version-with-older-versions.md)
* [Precision testing using frozen cadavers](/xromm/tips-and-tools/xromm-precision-testing-using-frozen-cadavers.md)
* [Import XYZ points into Maya](/xromm/tips-and-tools/xromm-import-xyz-points-into-maya.md)

## XMAPortal User Manual

* [Getting Started with the XMAPortal](/xromm/xromm-xmaportal-user-manual/xromm-getting-started-with-xmaportal.md)
* "[Sandbox](http://xmaportal.org/sandbox/)" for practicing and testing
* [Data Organization](/xromm/xromm-xmaportal-user-manual/xromm-data-organization.md)
* [Metadata Pool](/xromm/xromm-xmaportal-user-manual/xromm-metadata-pool.md)
* [Create a New Study](/xromm/xromm-xmaportal-user-manual/xromm-how-to-create-a-new-study.md)
* [Modify Study Metadata](/xromm/xromm-xmaportal-user-manual/xromm-how-to-modify-study-metadata.md)
* [Give access or revoke access to see your study](/xromm/xromm-xmaportal-user-manual/xromm-how-to-give-access-or-revoke-access-to-see-your-study.md)
* [Create Trials](/xromm/xromm-xmaportal-user-manual/xromm-how-to-create-trials.md)
* [Edit an existing trial](/xromm/xromm-xmaportal-user-manual/xromm-how-to-edit-an-existing-trial.md)
* [Upload files](/xromm/xromm-xmaportal-user-manual/xromm-how-to-upload-files.md)
* [Hide Files](/xromm/xromm-xmaportal-user-manual/xromm-hide-files.md)

| Key         | ctx                  |
| ----------- | -------------------- |
| Name        | XROMM                |
| Description |                      |
| Created by  | admin (Aug 06, 2007) |


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